G4SNVHunter - Evaluating SNV-Induced Disruption of G-Quadruplex Structures
G-quadruplexes (G4s) are unique nucleic acid secondary
structures predominantly found in guanine-rich regions and have
been shown to be involved in various biological regulatory
processes. G4SNVHunter is an R package designed to rapidly
identify genomic sequences with G4-forming propensity and to
accurately screen user-provided single nucleotide variants—as
well as other small-scale variants such as indels and MNVs—for
their potential to destabilize these structures. This allows
researchers to then screen these critical variants for deeper
study, digging into how they might influence biological
functions—think gene regulation, for instance—by impairing G4
formation propensity.